#!/usr/local/bin/bash
# molphy local ml analysis

file=work-conc

protml -mfR -l $file $file.ptn $file-nj.tpl >& $file.mlr 
mv protml.eps $file-ml.eps
mv protml.tpl $file-ml.tpl
mv protml.tre $file-ml.tre
repnamegb $file-ml.eps > $file-ml-name.eps
bbfix $file-ml-name.eps


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