CONSEL: a program for assessing the confidence of phylogenetic tree selection ============================================================================= CHANGE LOG Time-stamp: "2011-05-12 16:29:28 shimo" * 2001-06-11 version 0.1a release * 2001-06-27 consel.c: The signed distance and the curvature can be estimate by MLE (-m option). The default extention of PAML has been changed from lfh to lnf. catpv.c: Labels of p-values are changed (bp->np, nbp->bp). * 2001-08-10 version 0.1b release * 2001-12-10 freadmat.c: accepts new paup format. catpv.c: -s option for sort by item. * 2001-12-10 version 0.1c release * 2002-01-10 makermt.c: The only-SH mode (-f) is added. consel.c: The rescaling approximation (-f) is implemented. consel.c: now calculates Bayesian posterior probabilities. catpv.c: The file format is changed. * 2002-01-24 version 0.1d release * 2002-02-20 makermt.c, consel.c: now handles multiple rmt files. * 2002-02-28 consel.c: new model is added --- chi fitting for dimension estimation. * 2002-07-26 treeass.c: calculates histogram of splits and trees * 2002-08-21 freadmat.c: accepts the latest paup format * 2002-08-21 version 0.1e release * 2002-08-30 rand.c: uses mt19937 random number generator * 2002-09-03 catpv.c: sorting option is changed * 2002-09-03 version 0.1f release * 2003-07-28 consel.c: vcalpval is fixed to avoid unnecessary warnings * 2004-07-13 version 0.1g release * 2004-11-11 consel.c: genrep is fixed. (consel was segfaulted when mm